Fig. 1 Immunodeficiencies affecting cellular and humoral immunity. ADA Adenosine Deaminase, Adp adenopathy, AR Autosomal Recessive inheritance, CBC Complete Blood Count, CD Cluster of Differentiation, CID Combined Immunodeficiency, EBV Epstein-Barr Virus, EO Eosinophils, HHV8 Human Herpes virus type 8, HIGM Hyper IgM syndrome, HLA Human Leukocyte Antigen, HSM Hepatosplenomegaly, HPV Human papilloma virus, IBD Inflammatory bowel disease, Ig Immunoglobulin, MC Molluscum contagiosum, N Normal, not low, NK Natural Killer, NN Neonatal, NP Neutropenia, SCID Severe Combined ImmunoDeficiency, Staph Staphylococcus sp., TCR T-Cell Receptor, XL X-Linked

Fig. 2 CID with associated or syndromic features. These syndromes are generally associated with T-cell immunodeficiency. αFP alpha- fetoprotein, AD Autosomal Dominant inheritance, AR Autosomal Recessive inheritance, CMF Flow cytometry available, EDA Anhidrotic ectodermal dysplasia, EDA-ID Anhidrotic Ectodermal Dysplasia with Immunodeficiency, FILS Facial dysmorphism, immunodeficiency, livedo, and short stature, FISH Fluorescence in situ Hybridization, HSM Hepatosplenomegaly, HSV Herpes simplex virus, Ig Immunoglobulin, VZV Varicella Zoster virus, WAS Wiskott-Aldrich syndrome, XL X-Linked inheritance

Fig. 3 Predominantly Antibody deficiencies. Ab Antibody, Adp adenopathy, Anti PPS Anti- pneumococcus Antibody, AR Autosomal Recessive inheritance, CD Cluster of Differentiation, CDG-IIb Congenital disorder of glycosylation, type IIb, CMV Cytomegalovirus, CT Computed Tomography, EBV Epstein-Barr Virus, Dip Diphtheria, GI Gastrointestinal, Hib Haemophilus influenzae serotype b, Hx medical history, Ig Immunoglobulin, SPM Splenomegaly, subcl subclass, Tet Tetanus, XL X-Linked inheritance

Fig. 4 Diseases of Immune Dysregulation. AD Autosomal Dominant inheritance, ALPS Autoimmune lymphoproliferative syndrome, AR Autosomal Recessive inheritance, CD Cluster of Differentiation, CMF Flow cytometry available, CSF Cerebrospinal fluid, CTL Cytotoxic T-Lymphocyte, EBV Epstein-Barr Virus, GOF Gain-of-function, HLH Hemophagocytic lymphohistiocytosis, HSM Hepatosplenomegaly, IBD Inflammatory bowel disease, IFNγ Interferon gamma, Ig Immunoglobulin, IL interleukin, Inflam Inflammation, NK Natural Killer, NKT Natural Killer T cell, T T lymphocyte, XL X-Linked inheritance

Fig. 5 Congenital defects of phagocyte number, function, or both. For DHR assay, the results can distinct XL-CGD from AR-CGD, and gp40phox defect from others AR forms. AD Autosomal Dominant inheritance, AML Acute Myeloid Leukemia, AR Autosomal Recessive inheritance, BCG Bacilli Calmette-Guérin, CBC Complete Blood Count, CD Cluster of Differentiation, CGD Chronic Granulomatous Disease, CMML Chronic MyeloMonocytic Leukemia, DHR DiHydroRhodamine, IUGR Intrauterine growth retard, LAD Leukocyte Adhesion Deficiency, NP Neutropenia, PNN Neutrophils, SCN Severe congenital neutropenia, WBC White Blood Cells, XL X-Linked inheritance

Fig. 6 Defects in Intrinsec and Innate Immunity. AD Autosomal Dominant inheritance, AR Autosomal Recessive inheritance, BCG Bacilli Calmette-Guérin, BL B lymphocyte, CMC Chronic mucocutaneous candidiasis, HSV Herpes simplex virus, IFNγ Interferon gamma, Ig Immunoglobulin, IL interleukin, LOF Loss-of-function, MSMD Mendelian Susceptibility to Mycobacterial Disease, PMN Neutrophils, XL X-Linked inheritance